Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851809.1_cds_XP_016511620.1_24342
CDS Infomation

[gene=LOC107828763] [db_xref=GeneID:107828763] [protein=glycerol-3-phosphate acyltransferase 5-like] [protein_id=XP_016511620.1] [location=complement(join(45601..45858,46495..47172,47830..48381))] [gbkey=CDS]
Sequence

ATGGAGTCAATTATTGCTGAGTTTGAAGGAATTCTCTTAAAAAATCCAGATCCCTTTAGT
TACTTCATGTTAGTGGCATTTGAAGCTTCTGGTCTTATAAGATTTGCTATTTTACTAATG
TTATGGCCAGTAATTCGAGTTCTTGAAATTTGTGGGAAAAGAAATAAAGGGTTAAAGTTA
ATGATATTTGTAGCTACTGCAGGTGTAAAAATATCTGAAATTGAAGCTGTGGCTAGAGCT
GTTTTACCTAAGTTTTATTTTGATGACATTAATATGGATTGTTGGAGTATTTTTAGCTCT
TTTGATAAGAGAATTGTGGTGACAAAAATTCCAAGAATTATGGTTGAGAGATTTGTGAAA
GAGCATTTGAAAGCTGATTATGTTATTGGGAGTGAACTTGTTGTTAATAAATCTGGTTTA
GCTACTGGATTTATTAAGGATGATTTTGACTTGATTAAGGAAAAAGTTACTGAATTATTT
GGTGGTGAACAACCTAGCTTAGGCCTTGGAAGGCCTCAATCAGTTGTTTCTTCATTTCTT
TCTCAATGCAAGGAACAATTAAATCCACCATTTATGAGCAGCAAAAATCAAGATCACCAA
CTTATCAAACCATTACCAGTAATTTTCCATGATGGTCGTTTAGGCAAACGTCCAACACCA
TCTACATCTCTTTTAATCCTTTTATGGCTTCCCTTTGGTATAATAATAGCAACAATACGT
ATTTTAGTAGGGTTAATGCTTCCATTATCCCTCATACCATATCTAGCTCCATTATTCGGT
GGTAAAGTCATCGTCAAAGGCAAACCACCACCACCAGCCTCCACCACTAACTCGGGCGTG
CTTTTCGTGTGCACTCATCGAACCCTACTGGATCCGGTTGTCCTATCCACCGTACTTCAA
CGTAAAATTCCGGCCGTGACATACTCAATCTCTCGATTATCGGAGATTTTATCGCCGATA
CCGACCGTTCGATTGACAAGAATTCGGGAAGTAGATGCACAAAAAATCAAACGACAACTT
GAGAAAGGAGATTTGGTTGTTTGCCCTGAAGGAACAACATGTAGGGAACCATTTTTATTA
AGGTTTAGTGCACTTTTTGCAGAATTAACCGATCGGATTGTGCCAGTGGCTATGAATTAT
AGAGTAGGGTTTTTTCATGCAACAACGGCTAGGGGATGGAAAGCAATGGACCCAATTTTC
TTCTTCATGAACCCTAGGCCAGTGTATGAGGTAACATTCTTGAATCAGCTACCAGCTGAA
GCCACGTGTTCATCTGGGAAAAGTCCACATGATGTTGCAAATTATGTTCAGAGGATTTTA
GCTGCAACATTAGGGTTTGAGTGTACAGACTTTACAAGAAAGGACAAATATAGGGTTCTT
GCTGGAAATGATGGAATAGTTTCGCAAAATTATGGGACAAATGGAGTTAAAAGTTTAATG
AACACGTTTAAGCAAGTGGTGGGCACTTTCAATCCTTTTATTCACTGA

Peptide Sequence

PEP ID

XP_016511620.1
PEP Infomation

PREDICTED: glycerol-3-phosphate acyltransferase 5-like [Nicotiana tabacum]
Sequence

MESIIAEFEGILLKNPDPFSYFMLVAFEASGLIRFAILLMLWPVIRVLEICGKRNKGLKL
MIFVATAGVKISEIEAVARAVLPKFYFDDINMDCWSIFSSFDKRIVVTKIPRIMVERFVK
EHLKADYVIGSELVVNKSGLATGFIKDDFDLIKEKVTELFGGEQPSLGLGRPQSVVSSFL
SQCKEQLNPPFMSSKNQDHQLIKPLPVIFHDGRLGKRPTPSTSLLILLWLPFGIIIATIR
ILVGLMLPLSLIPYLAPLFGGKVIVKGKPPPPASTTNSGVLFVCTHRTLLDPVVLSTVLQ
RKIPAVTYSISRLSEILSPIPTVRLTRIREVDAQKIKRQLEKGDLVVCPEGTTCREPFLL
RFSALFAELTDRIVPVAMNYRVGFFHATTARGWKAMDPIFFFMNPRPVYEVTFLNQLPAE
ATCSSGKSPHDVANYVQRILAATLGFECTDFTRKDKYRVLAGNDGIVSQNYGTNGVKSLM
NTFKQVVGTFNPFIH

Transcript Sequence

Gene sequence data has not been registered.